inherently 2d information
First off, there is nothing illegal about using a 3rd party tool to access and manipulate your own IP that you paid huge dollars to create. By that I mean, not just what you paid meglodesk for software, support, and training, but what you paid people in dollars for time in front of the tube creating and revising your drawings. The IP is what it's all really about, not the tool or the file format or the interface, although those things are nice.
Secondly, I have some experience w/ 3D software for routing various lines. Basically, it seems to aggrevate all the negatives of 3D CAD. It's very easy to generate a pretty picture of something that won't work. The highest end developers for the highest end packages have done huge amounts of work on this, and in my opinion have fallen well short. I doubt Alibre will do this sort of thing any time soon, as there is much lower hanging fruit.
Thirdly, some data is inherently 2 dimensional. There is nothing 3 dimensional about a wiring or hydraulic schematic. The schematic is defined as 2D symbols creating a simplified 2D representation of a system. This is probably the highest value density data that will be created about a product, and it is extremely important to get it right and manage it appropriately (try troubleshooting w/o it, or w/ a wrong version).
I believe the best course of action for Alibre would be to get in bed w/ a competent 2D tool and work out some snazzy integration, file management etc. If they wanted to do something novel, there would be plenty of opportunity down this path as there isn't anything that is good on the market for this purpose.