If you don't have Direct Editing in Atom 3D then the workflow I would use is:How using my Alibre version can I cut the model to other lengh?
Or copy and paste that projected sketch into a brand new Alibre part's sketch and extrude to any final length you want. Then you don't have the STEP model geometry sitting in the part's history.You can project to sketch on the end of the extrusion then either boss cut intk it to reduce its length or boss extrude from it to lengthen it